CDS

Accession Number TCMCG024C39938
gbkey CDS
Protein Id XP_022018784.1
Location join(111093845..111093847,111095244..111095339,111095423..111095629,111096360..111096482,111096629..111096712,111096808..111096858,111097082..111097174,111097389..111097529,111097621..111097701,111098226..111098473,111098547..111098718,111098874..111098989,111099242..111099299,111099741..111099806,111099896..111100102,111100687..111101112,111101920..111102014,111102092..111102340,111102878..111103503,111104157..111104360,111104987..111105165)
Gene LOC110918806
GeneID 110918806
Organism Helianthus annuus

Protein

Length 1174aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA396063
db_source XM_022163092.2
Definition tetratricopeptide repeat protein SKI3 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category A
Description tetratricopeptide repeat
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12600        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGACGAAAAGGACCGTCAAGATGACTCTGTTTTCACGCAGTTGAGTGAAGCTGTAGCCACCAACCCAGACGACCCATCGGCTCATTTCAATTTGGGTTTGTACCTGTGGGACCGGATTGGAGAAGAATCTAAGCAAAAGGCAGCAGAGCATTTTGTGATTGCAGCAAAGCTCAACCCACAAGATGCAAATGCTTTTAGGTATTTGGGTCATTATTATAGCAAAGTTTCAACTGATACTCAAAGAGCTCTCAAGTGTTATCAAAGAGCTCTTGCTCTCTCTCCTCAAGATTCTGAATCCGGGGAATCAATGTGTGATTTGTTGGATAAAGAAGGAAAAGAGAGTTTGGAGGTTGCTGTCTGTCGTGACGCTTCAGGGAAGTCTCCAAGGGCATTTTGGGCATTTCGTAGACTAGGTTTTCTACAGGTCCATCAGAAGAAGTGGTCCGAAGCAGTTCAAAGTCTTCAGCAGGCCATCAGAGGATATCCCACATCTGCTGATTTATGGGAGGCCTTAGGTCTTGCCTATCAACGATTAGGCATGTTCACCGCAGCTATTAAGTCATATGGTCGAGCTATTGAGTTGGAGGAATCACGCGTGTTCTCTTTAATTGAGAGTGGATATGTCTTCATGATGATTGGTTCACATCGAAAGGGAGTTGAGATGTTTCAACAAGCTTTACAAATATCACCTGAAAATTTAGCTGCACACTACGGTCTTGGATGTGCGCTTCTTGAGTTATCAAAGGAATGTATAAGTTCAGGTGCATTTAGATGGGGAGCTTCAGTATTAGAGGAGGCATCAAAAGTTGCAAAGGCTGGTACATATTTGGGCAAAAATGTTTCATGCATGTGGAAGTTGCATGGTGATATTCAGATATCATATGCAAAGTGTCTTCCCTGGATGGATGAAAATCCTGCGTTGGAAACCGATAAAAAAGCTTTATCGGCTTCCATAATGTCATGGAAAAACTCGTGCTTTTCAGCTGCACTGGGTGCCAAACACTCCTATCAACAGTCTCTGCATTTGGCTCCGTGGCAAGCTAACATCTACACCGATATTGCAATCACTATAGATGTCATTAACTCTTTTAAGGACGCTGAGAAGCATGATCTTATTCAAGGGGAATTACCTGAGAAAATGATAATAGGGGGATTATTACTCGAGAGTTGCAATAATGAGTTCTGGGTTGCATTGGGATGCTTATCACATCATGTGGAAATGAAACAACATGCTTTTATCAGGTCGTTGCAGTTGGATGTATCATTAGCTGTTGCCTGGGCATATCTCGGGAAGCTTTACAGAAAACAAGGTGAAAAGAGTTTGGCCCAGCAAGCATTTGATCGGGCCAGGAGTATTGATCCTTCTCTTGCGTTACCATGGGCTGGCATGTCGGCTGATATGTCCATTAGGGCGCTTAAGCCAGATGAAGCTTATGATTGCTGTTTACGGGCTGTGCAGATACTACCACTTCCAGAATTTCAAATGGGTCTTGCAAAGCTTGCTATTCTTTCTGGTCAACTTTCATCTTCAGAGGTATTTGGGCCCATACGTCAGGCCTTGCATCACGCACCCCAATATCCTGAAGCTCACAATCTTCTAGGGCTTGTATGTGAGGCAAGAGGTGATCATCTCTCTGCTATTACGTCTTTTAGGTTAGCACGTTGTGCAGTCAACATTTCTTCTGGTGATTCTCAAAAACTCCTTGATATTTCAATCAATTTGGCGAGGACTTTCTGTAAGGCTGGCAAAGCTTATGAAGCGGTACAAGAATGTGAAGAGTTAAAGAAAAAAGGCGTTCTTGATTATGAAGGTTTGCATATATATGCTTTATCTTCATGGAAACTCGGCAAAAACGATCAGGCTTTGTCTGTAGTGAGAATTTTAGCCGCACGCGTTAAATCATTGGAACCAAACCTCGCTTCTTTATCCATAAGTTTTATATGTAGATTACTTTATTATATTTCCGGGCGAGAATCAGTTATTACAAGCATTCTGAAAATGCCCAAGAGTTTGTTTGAAAGTTCCAAAGTTAGTTTTGTGGTATCCGCTATTCATATTCTCGATCAAAGCAATCAGCTTGAGGCAGTTGTTTCAAGTAGTCGATCTTCGCTTCTAACTCATGATGAAATTACCGGAATGCATTTTTTGATAACGTTAAGTAAATTGGTAAAAAATAGCTCAGAAGATTGTTTGGGGATTCAGAATGGAATATATCACCTTAGAAAAACTCTCCATAAATACCCTAACAGTTATATGCTAAGGAATTTTCTTGGATATTTATTAATATCTAGTAATGAACGGAAAGATACTCATTTGTCTACTAGATGCTTTACTGTGAGGTGTGCCACATCAGCGTGTCCTGAGGACGAAGGTTTCAAACGCGCACCTGAAATTCTCGGTGCAAGTGTGGTCGCTTGCTATACAACAGGGAGTTTAAAACATAAATACTCTTTTCCTGCCTGTAAAGATCAATCGCCATATCAGCACGGATCACTTAAACTACTGCAAAAGTGGTACCATCAAGAACCATGGAATAAAAATGCGCGATATCTGTTAATCCTTAACTATATGCAGAAGGCTCGCGAAGAGCGATACCCGCAACATATACACACAGGACTCGAAAGATTAACACGTTTGGCCCTTTCAGACGAATCTCGTCACTATAAAAGATTCCAACTTCTAATTTGTGCTTCTGAGTTAAATTTACAAAGCGGAAACGTTATCGGCTGCATAAATCACGCTACAAATGCTTCAAAGATTTCCGTCTCTGATGCGTATCTTTTCTTTGCCCACTTGCTATTATGTCGGGCCTATGCCGCAGAAGATAACCGGCCCCGTTTACGTGAAGAGTACGTGAGATGTTTAAATCTGAAAACAGATTATCATATCGGTTTGATAGGGTTAAAATATATCGAATGTTTGTATGGGCTAGCAGAAGCAAATGATAATATAATCGAATTGAAGTTTGAAGAATGTTCGAAGGATATAAAGTATTCTTGGAATGTTTGGATGGCGATATTGAAATTAGTTCAAGGTTTGATTGCTGTTTGGAATAGAGATTTTGTTGGTGCGGAAGAGTTGTTTGCACAAGCATGTTCGTTAAACGCTTATGAAAGCTGTCTGTTTTTGTGTCATGGTGCTGTATGTATGGAACTTGCTAGACAACAATGCAATTCAGATTACCTGTTGCTTGCAACCGGAAGTTTGAAGAAAGCTAAAGACACTTGTGGGGCCCCCTTACCGATCTTGCAACTGTTACTAGCACAAGCCGAAGCAAGTCTTGGATACAAAGGTCAATGGGAACGGTACCTTCAGCTTGAATGGTCAACTTGGCCTCCAGAGATGAGGCCGGCTGAGATCTTTCTTCAAATGCATTTGCTTTTGGGACCGTTGGATGACAGTATGCATTCTACATCACGAACAAAACATTATCAGAAAAATCCGTTACGATGGATTCTTCAAGCGATTCACTTGAATCCGTCTTGTTCAAGATATTGGAAAGCTTTACAGAATTTGTAA
Protein:  
MGDEKDRQDDSVFTQLSEAVATNPDDPSAHFNLGLYLWDRIGEESKQKAAEHFVIAAKLNPQDANAFRYLGHYYSKVSTDTQRALKCYQRALALSPQDSESGESMCDLLDKEGKESLEVAVCRDASGKSPRAFWAFRRLGFLQVHQKKWSEAVQSLQQAIRGYPTSADLWEALGLAYQRLGMFTAAIKSYGRAIELEESRVFSLIESGYVFMMIGSHRKGVEMFQQALQISPENLAAHYGLGCALLELSKECISSGAFRWGASVLEEASKVAKAGTYLGKNVSCMWKLHGDIQISYAKCLPWMDENPALETDKKALSASIMSWKNSCFSAALGAKHSYQQSLHLAPWQANIYTDIAITIDVINSFKDAEKHDLIQGELPEKMIIGGLLLESCNNEFWVALGCLSHHVEMKQHAFIRSLQLDVSLAVAWAYLGKLYRKQGEKSLAQQAFDRARSIDPSLALPWAGMSADMSIRALKPDEAYDCCLRAVQILPLPEFQMGLAKLAILSGQLSSSEVFGPIRQALHHAPQYPEAHNLLGLVCEARGDHLSAITSFRLARCAVNISSGDSQKLLDISINLARTFCKAGKAYEAVQECEELKKKGVLDYEGLHIYALSSWKLGKNDQALSVVRILAARVKSLEPNLASLSISFICRLLYYISGRESVITSILKMPKSLFESSKVSFVVSAIHILDQSNQLEAVVSSSRSSLLTHDEITGMHFLITLSKLVKNSSEDCLGIQNGIYHLRKTLHKYPNSYMLRNFLGYLLISSNERKDTHLSTRCFTVRCATSACPEDEGFKRAPEILGASVVACYTTGSLKHKYSFPACKDQSPYQHGSLKLLQKWYHQEPWNKNARYLLILNYMQKAREERYPQHIHTGLERLTRLALSDESRHYKRFQLLICASELNLQSGNVIGCINHATNASKISVSDAYLFFAHLLLCRAYAAEDNRPRLREEYVRCLNLKTDYHIGLIGLKYIECLYGLAEANDNIIELKFEECSKDIKYSWNVWMAILKLVQGLIAVWNRDFVGAEELFAQACSLNAYESCLFLCHGAVCMELARQQCNSDYLLLATGSLKKAKDTCGAPLPILQLLLAQAEASLGYKGQWERYLQLEWSTWPPEMRPAEIFLQMHLLLGPLDDSMHSTSRTKHYQKNPLRWILQAIHLNPSCSRYWKALQNL